PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023898531.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 357aa    MW: 38684.7 Da    PI: 7.381
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023898531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.41.7e-17242276135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  XP_023898531.1 242 CLHCGSEKTPQWRTGPMGPKTLCNACGVRFKSGRL 276
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MEVPEIYMGG YFGGAGGAGQ YSPEKQKTTE HFTVDDLLDF SNEDAVMADG FLDNVTANST  60
DSSTVTAVDS CNSGSRPHFS ACIGSRSFAD SQFSGDLCVP YDDLAELEWL SNFVDDSFSA  120
QQDFQALQYL NGPTTTTTAT ATVSKTQASE SSSSSETLLP SRNAPFFKPE TPLPGKARSK  180
RSRAAPCDWS TRLVHVAAAT TTTPEDQKQQ LPTAMKTTTS KKKESVVMDS TSSSSSSSGR  240
KCLHCGSEKT PQWRTGPMGP KTLCNACGVR FKSGRLVPEY RPSASPTFVS AKHSNSHRKV  300
LELRRQKEMQ RAQHQQFLNQ ASIFGVANGG GGGGGDDYLI HHHHHHQRSG PDFRHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-66GATA family protein