PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023899099.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 337aa MW: 37850.4 Da PI: 5.5917

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023899099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5.2e-17	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv +++ +G g+W+++++ g+ R++k+c++rw +yl XP_023899099.1 36 RGLWSPEEDEKLVTYITAHGLGSWSSVPKFAGLQRCGKSCRLRWINYL 83 788*******************************************97 PP
2	Myb_DNA-binding	52.6	1.1e-16	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T eE+++++d+++ G++ W+ Ia++++ gRt++++k++w++ XP_023899099.1 89 RGTFTSEEEQIIIDVHRIVGNK-WAQIAKHLP-GRTDNEVKNFWNS 132 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MINTKPNSSA EEEEEGLMIS EKMGGHRCCT KQKVKRGLWS PEEDEKLVTY ITAHGLGSWS 60 SVPKFAGLQR CGKSCRLRWI NYLRPDLKRG TFTSEEEQII IDVHRIVGNK WAQIAKHLPG 120 RTDNEVKNFW NSCIKKKLMS QGLDPNTHNL IPSHQRASKK VACNVSPNHQ QPNSVFTLNS 180 QFTDVSTFEM KTPIITVPET DQPPLLQNPN LVWNQSFTDF SSFPHVSSVE STPNISSSSS 240 SSVNLSGFGV LNHENCVWGA NTLEPFEAPG LEGEQYTLTQ PQQEKDKVSE MVTNKVIHQP 300 MDTSFDGSSF DLGFVESSLM SDIMYDELSS MDDFAWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	3e-86	MYB family protein