PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023899151.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

DBB

Protein Properties

Length: 215aa MW: 22946.3 Da PI: 6.22

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023899151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.7	1.5e-05	6	49	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC +C ++H H++vpl XP_023899151.1 6 QCSACETAEATVVCCADEAALCCSCDHKIHTAnklaskHQRVPL 49 7****99*******************66899999999986 PP
2	zf-B_box	27.9	4.8e-09	56	95	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++C+ ++e +fC +++ llC++C +++H H XP_023899151.1 56 PNCDICQETVGYFFCLEDRALLCRKCDVAIHTAnsyvssH 95 79****99*******************554555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MKIQIQCSAC ETAEATVVCC ADEAALCCSC DHKIHTANKL ASKHQRVPLS SSSTTPNCDI 60 CQETVGYFFC LEDRALLCRK CDVAIHTANS YVSSHQRFLL TGVKVGLEAT EPCASSTKEK 120 LSSAEKVSEA MLSQPMSKGG GMASFTGESE ELMPRQLSGN VTLPTIKAPL AGGGTIPGVV 180 PEWCLDEYLG LTGFSQSYGV MYCMLSKADP RHFGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-66	DBB family protein