PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899208.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 337aa    MW: 37254.9 Da    PI: 9.2756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.000182252621254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk L
  XP_023899208.1 225 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFL 262
                     7788899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MELEATMLFG PQMSLWSSNS QSAHDLKIKE ERSESFRKYT ELLHSSSEDY HFAPTSHIKN  60
ERNDLSEKLL LKTISTKGFY SNAQNCPSFG GVAMPSRGNF SQIYPSINIS NLNQSPSSSE  120
ISRSLDMNLQ ALNLLTPERY SGSFSQPSHD SLGLFKASPS FGLDHMHMQQ LTHRPSFSPN  180
NISPFTNRIT EEKRPSSLME AKTAQAASKK SRLEPRASCP PFKVRKEKLG DRIAALQQLV  240
APFGKTDTAS VLMEAIGYIK FLHNQIETLS VPYMKSSRNK ACRTMQAGSV DDGNEEQKRD  300
LRSRGLSLVP LSCMSYVTGD SGGGGIWPQP NYGGGGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-80bHLH family protein