PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899662.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 342aa    MW: 37130.3 Da    PI: 8.7454
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.92.8e-18116149135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nCgtt TplWRr++ g++ +CnaCGly++++g+
  XP_023899662.1 116 CQNCGTTITPLWRRDEAGHT-ICNACGLYHKLHGS 149
                     ********************.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MRPVGLKRGA TVSQPLPGPR NDRSNSPSLM QGGATYVSAD QSTNGTCPGG GRCNGTGGHE  60
GCNGCPAYNN RISKTAQIAL QQTNTPANEP NSNPAHVSNL VNNYQSTGAT SVIIACQNCG  120
TTITPLWRRD EAGHTICNAC GLYHKLHGSH RPVQMKKAEI KRRKRVVPVD SPSHQHPSPL  180
PPDNNNIITS EMPTLPGSAS EPRRRDPFGP VPVDFTDHFR RKYTLQQRTS TDEHVENGAI  240
AGSSRKRSFS KAASDDNEPY PHAQNVRLTK DDHIDPSLPA PQDAVGKSTR PPSIKNVRRA  300
ELQREAERMR QMLLAKEKEL AELDGQEHET EAEASEAGGV IV