PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899791.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 234aa    MW: 26019.2 Da    PI: 7.8095
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.1e-2180131155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+++AeIrdp++ng  +r++lg++ t+e+Aa a+++a+ k++g
  XP_023899791.1  80 PHFRGVRRRP-WGKYAAEIRDPKKNG--TRVWLGTYETPEDAALAYDKAAFKMRG 131
                     689*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDSDLAALDS IQQYLLGDFE PTTMKFSQSP SFGDKVFLPE SWGYSVPSNN EVVPVKVEPL  60
EAASKEKVVV AAAERETHAP HFRGVRRRPW GKYAAEIRDP KKNGTRVWLG TYETPEDAAL  120
AYDKAAFKMR GSKAKLNFPH LIGSSQVVEP VRVTHKRRST ELPSPSSDDG GSKNKRSIIS  180
WSSTSSAGQA DIPILEKGSS DQAIDIAWQS LVNEPITWRR SLDYLSYDIL NSMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-43ERF family protein