PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023899957.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 267aa MW: 30212 Da PI: 6.7209

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023899957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll d++k +G g W+++ r g++R++k+c++rw++yl XP_023899957.1 14 KGAWTAQEDKLLTDYIKAHGEGKWAKVHRDTGLKRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	47.6	3.9e-15	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T +E++l+++++k+lG++ W++Ia +++ Rt++++k++w++ XP_023899957.1 67 RGNITNDEEDLIIRLHKLLGNR-WSLIAGRLP-ERTDNEIKNYWNTI 111 7999****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MGRSPCCSQE GLNKGAWTAQ EDKLLTDYIK AHGEGKWAKV HRDTGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TNDEEDLIIR LHKLLGNRWS LIAGRLPERT DNEIKNYWNT ILAKREQRKP 120 LNHSKTAKKA ITRKVDESQN TDVIHSKAKS PSMHGNVVNS IEVHPRSSDG LSPSTSTEEN 180 SLDLLMDFDV GEIGLSDFLN SDFTKLNDFE MFNMNSLIEG DVSKPAFVSH TLLSPKDVSE 240 DFSVQASMDS DFRSLASFLE SAEEWTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-60	MYB family protein