PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900260.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 317aa MW: 34895.9 Da PI: 6.8251

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.1	2.5e-40	51	111	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s XP_023900260.1 51 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 111 6899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MGLTSLQVCM DSSDWLQGTI NDESGMDSSS PSGDMLTCSR PLIERRLRPP HDQALKCPRC 60 DSTHTKFCYY NNYSLSQPRY FCKTCRRYWT KGGTLRNIPV GGGCRKNKKV SSKKPNDQPN 120 QNHLGSSSSS HNPTDLQLSF PEVQYSQYSN ILGTHGALGN PTFMEAKYNN NGMLENSIRP 180 IDFMENKLEA IVGNSRNYDF MGNGDHLGMV GGLGDHLSGH SLAPQFGLCS PLGMSNIDGN 240 SGTFMDTCQR LMLPYDHAND QDHNAMDVKP NTKLLSLDWQ DQGCSDAGKD SFAYINGLGS 300 WSGMMNGYGP STTNPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	1e-62	Dof family protein