PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900290.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 242aa    MW: 27366.4 Da    PI: 6.9486
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-1268120155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     r+++h  +Er+RR+++N+    Lr+llP       ++K s ++   +Av+YI++Lq
  XP_023900290.1  68 RKVMHRDMERNRRKEMNKLHGSLRSLLPLeY---IKGKRSISDHMNEAVNYINHLQ 120
                     7899*************************77...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MFSSDQNGEK VFQISTTTYQ HHTVPQDLIL PDALMDDSTL NNDKGKGRQQ KSLATLDSCE  60
ITHEDNDRKV MHRDMERNRR KEMNKLHGSL RSLLPLEYIK GKRSISDHMN EAVNYINHLQ  120
ENIKQLGAKR DELKKLSDLI ALVPESGTSA LCLPTFVMVR PCLDGVEITV NSSFMEQGLP  180
LSRVLQILLE EGLAVVSCVS TKVNQRLIYT IQSQVSGMTH VDLPELQQRL TEAIPLSQKF  240
PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-46bHLH family protein