PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900455.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 188aa    MW: 21743.3 Da    PI: 5.306
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900455.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM133.81.1e-4181281128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeelvv++L++k++  +++  ++i+++d+y ++Pw+++ k+ ae ++wyf+s+r +      ++nr+t++gyWk  g +++v+++
  XP_023900455.1   8 LPPGFRFYPTDEELVVHFLHRKATLLPCHP-DIIPDLDLYPHDPWEIDGKALAEGNKWYFYSRRTQ------NSNRITSNGYWKPMGIEEPVMNS 95 
                     79*************************999.99**************977778899******9977......579******************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g++vg+kk Lvfy g+ap+++kt+W+mheyrl
  XP_023900455.1  96 NGKKVGIKKHLVFYVGEAPSSVKTNWIMHEYRL 128
                     *******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MGDNNVNLPP GFRFYPTDEE LVVHFLHRKA TLLPCHPDII PDLDLYPHDP WEIDGKALAE  60
GNKWYFYSRR TQNSNRITSN GYWKPMGIEE PVMNSNGKKV GIKKHLVFYV GEAPSSVKTN  120
WIMHEYRLSD TGSSSRSSKR SGHPKMDYSK WVICRVYERD EDDDGTELSF LDEVYLSLDD  180
LDEISLPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-81NAC family protein