PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900456.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 153aa    MW: 17486.8 Da    PI: 9.5504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.85.9e-4281281128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeelvv++L++k++  +++  ++i+++d+y ++Pw+++ k+ ae ++wyf+s+r +      ++nr+t++gyWk  g +++v+++
  XP_023900456.1   8 LPPGFRFYPTDEELVVHFLHRKATLLPCHP-DIIPDLDLYPHDPWEIDGKALAEGNKWYFYSRRTQ------NSNRITSNGYWKPMGIEEPVMNS 95 
                     79*************************999.99**************977778899******9977......579******************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g++vg+kk Lvfy g+ap+++kt+W+mheyrl
  XP_023900456.1  96 NGKKVGIKKHLVFYVGEAPSSVKTNWIMHEYRL 128
                     *******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MGDNNVNLPP GFRFYPTDEE LVVHFLHRKA TLLPCHPDII PDLDLYPHDP WEIDGKALAE  60
GNKWYFYSRR TQNSNRITSN GYWKPMGIEE PVMNSNGKKV GIKKHLVFYV GEAPSSVKTN  120
WIMHEYRLSD TGSSSRSSKR SGHPKMVKTI VNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.16e-61NAC family protein