PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900563.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 488aa MW: 54770.7 Da PI: 5.5415

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.4	3.2e-35	20	110	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye+++d++++e++sws+n+nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++ XP_023900563.1 20 FLIKTYEMVDDSTTDEIVSWSSNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPEK---------WEFANEDFMKDQKHLLKN 105 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_023900563.1 106 IHRRK 110 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDGAPTTSGS GGGGGGPAPF LIKTYEMVDD STTDEIVSWS SNKNSFVVWN PPEFARLLLP 60 TYFKHNNFSS FIRQLNTYGF RKIDPEKWEF ANEDFMKDQK HLLKNIHRRK PIHSHSHPQG 120 SMMDPERAAF EEEIERLARE KASLEANILR SKQQRSAAKL QFEDLKQRVD SMEQRQESLL 180 TFLDKALQDP TFAEILARKI ESMDFSAYNK KRRLPQVDQS PPVMENSFVD NNSSSRPEFG 240 NVFHQDFSSK LRLELSPSVS DINLVSHSTQ SSNEDGDSPR RKISGEPKGV QMRTEGFVFP 300 PETLDLSDTG ASFTLKMDST FSRKLPTNEN PRLQLPLQPS LTSNEEGDGH ISCHLNLTLA 360 SSPLQVNKSP YSARMPQVAE ETGKSPNSKS NTNSKETDTT DFPKSINLAG DTTLSSSQRA 420 SNNNQVPAAA PVRVNDVFWE QFLTERPGCL DNEEASSTYR ANPYDEQDDG RSSLGMSRNA 480 KNMEQLTL

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDGAPTTSGS GGGGGGPAPF LIKTYEMVDD STTDEIVSWS SNKNSFVVWN PPEFARLLLP  60
TYFKHNNFSS FIRQLNTYGF RKIDPEKWEF ANEDFMKDQK HLLKNIHRRK PIHSHSHPQG  120
SMMDPERAAF EEEIERLARE KASLEANILR SKQQRSAAKL QFEDLKQRVD SMEQRQESLL  180
TFLDKALQDP TFAEILARKI ESMDFSAYNK KRRLPQVDQS PPVMENSFVD NNSSSRPEFG  240
NVFHQDFSSK LRLELSPSVS DINLVSHSTQ SSNEDGDSPR RKISGEPKGV QMRTEGFVFP  300
PETLDLSDTG ASFTLKMDST FSRKLPTNEN PRLQLPLQPS LTSNEEGDGH ISCHLNLTLA  360
SSPLQVNKSP YSARMPQVAE ETGKSPNSKS NTNSKETDTT DFPKSINLAG DTTLSSSQRA  420
SNNNQVPAAA PVRVNDVFWE QFLTERPGCL DNEEASSTYR ANPYDEQDDG RSSLGMSRNA  480
KNMEQLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	0.0	HSF family protein