PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900758.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Nin-like

Protein Properties

Length: 993aa MW: 109971 Da PI: 5.1759

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.3	3.7e-29	591	641	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_023900758.1 591 EKSISLEVLQQYFSGSLKEAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 641 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MAEPEEEKNS AFSATQKSTD HQNREPFMDF EDLDIGSWPL DQISFFNDIN DNTNDQLQPM 60 SPFLISNSYH NYSSLWALAD ENEDLAQPSS APLELSCTPY LETEKPMEKD DIMMFPSPLV 120 GQLPLDNPDG YFVSKERMMQ ALRHFKDMTE QNVLAQIWAP VKDGSRYVLT TSGQPFLIGT 180 LGNGLHQFRA ASVRYKFAVS EDGALGLPGR VFRQKFPEWT PNVQYYSCKE YPRRVHAQCF 240 NVQGSLALPV FEPSGQSCVG VVELIMNSSK INYAPEVDKV CKALEAVNLR SSEILDHPNT 300 QIYNEGRQNA LAEILEILAV VCEAHKLPLA QTWVPCENHS VLAHGGALKK SCASLNGSCM 360 GQVCMSTTDV AVYVVDPHMC GFREACIEHH LQKGQGVAGR AFLSHNSCFC ENITQFCKTE 420 YPLVHYARMF GLTSCFAICL RSTHTGDDDY ILEFFLPPST TDLYEQQILL GSLLEMMKQH 480 FQSLKIASGI ELEGEVSVEI IQVSTDGIVD SRLESVRITQ SMKSPPGPDS LHIVEDMVQL 540 DSSKQQLRVH LNDMNNKGIV ASNAGGRLDQ FSSLENEDMK KISERRRRKS EKSISLEVLQ 600 QYFSGSLKEA AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLQR VIDSVQCAEG 660 TFGLGSLTTS QIPVSVGSHP SSLNRSNKQT SPSFKVSEPQ EKNGSSTFKM LDEQAAIGDQ 720 LLRGRMLSPQ KVIHDQSRSP PEHGKSSNSS KTRSRSCEES AGTPNSQDSC QGSPPNESTL 780 VGHPYVSAIN EQCVNVEGSP ESPYQLTAAP NISPTNSIPD AFLMTEPQEL FGGILIEDSG 840 SSKDLRNLCP SVADAMVDEQ VPEFCSTNPP CPSLASNQPI PSLVHKISHV TARNEMKSVI 900 IKATYGDDII RFRISLNSGM LELKEEAAKR LKLEVGTFEI KYLDDDHEWI LIACDADLQE 960 CMDISRSAGS NMIRLLVQDV MPNLGSSWES SGD

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MAEPEEEKNS AFSATQKSTD HQNREPFMDF EDLDIGSWPL DQISFFNDIN DNTNDQLQPM  60
SPFLISNSYH NYSSLWALAD ENEDLAQPSS APLELSCTPY LETEKPMEKD DIMMFPSPLV  120
GQLPLDNPDG YFVSKERMMQ ALRHFKDMTE QNVLAQIWAP VKDGSRYVLT TSGQPFLIGT  180
LGNGLHQFRA ASVRYKFAVS EDGALGLPGR VFRQKFPEWT PNVQYYSCKE YPRRVHAQCF  240
NVQGSLALPV FEPSGQSCVG VVELIMNSSK INYAPEVDKV CKALEAVNLR SSEILDHPNT  300
QIYNEGRQNA LAEILEILAV VCEAHKLPLA QTWVPCENHS VLAHGGALKK SCASLNGSCM  360
GQVCMSTTDV AVYVVDPHMC GFREACIEHH LQKGQGVAGR AFLSHNSCFC ENITQFCKTE  420
YPLVHYARMF GLTSCFAICL RSTHTGDDDY ILEFFLPPST TDLYEQQILL GSLLEMMKQH  480
FQSLKIASGI ELEGEVSVEI IQVSTDGIVD SRLESVRITQ SMKSPPGPDS LHIVEDMVQL  540
DSSKQQLRVH LNDMNNKGIV ASNAGGRLDQ FSSLENEDMK KISERRRRKS EKSISLEVLQ  600
QYFSGSLKEA AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLQR VIDSVQCAEG  660
TFGLGSLTTS QIPVSVGSHP SSLNRSNKQT SPSFKVSEPQ EKNGSSTFKM LDEQAAIGDQ  720
LLRGRMLSPQ KVIHDQSRSP PEHGKSSNSS KTRSRSCEES AGTPNSQDSC QGSPPNESTL  780
VGHPYVSAIN EQCVNVEGSP ESPYQLTAAP NISPTNSIPD AFLMTEPQEL FGGILIEDSG  840
SSKDLRNLCP SVADAMVDEQ VPEFCSTNPP CPSLASNQPI PSLVHKISHV TARNEMKSVI  900
IKATYGDDII RFRISLNSGM LELKEEAAKR LKLEVGTFEI KYLDDDHEWI LIACDADLQE  960
CMDISRSAGS NMIRLLVQDV MPNLGSSWES SGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein