PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900759.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Nin-like

Protein Properties

Length: 898aa MW: 99144.6 Da PI: 6.1682

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900759.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	496	546	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_023900759.1 496 EKSISLEVLQQYFSGSLKEAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 546 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MGTPYLETEK PMEKDDIMMF PSPLVGQLPL DNPDGYFVSK ERMMQALRHF KDMTEQNVLA 60 QIWAPVKDGS RYVLTTSGQP FLIGTLGNGL HQFRAASVRY KFAVSEDGAL GLPGRVFRQK 120 FPEWTPNVQY YSCKEYPRRV HAQCFNVQGS LALPVFEPSG QSCVGVVELI MNSSKINYAP 180 EVDKVCKALE AVNLRSSEIL DHPNTQIYNE GRQNALAEIL EILAVVCEAH KLPLAQTWVP 240 CENHSVLAHG GALKKSCASL NGSCMGQVCM STTDVAVYVV DPHMCGFREA CIEHHLQKGQ 300 GVAGRAFLSH NSCFCENITQ FCKTEYPLVH YARMFGLTSC FAICLRSTHT GDDDYILEFF 360 LPPSTTDLYE QQILLGSLLE MMKQHFQSLK IASGIELEGE VSVEIIQVST DGIVDSRLES 420 VRITQSMKSP PGPDSLHIVE DMVQLDSSKQ QLRVHLNDMN NKGIVASNAG GRLDQFSSLE 480 NEDMKKISER RRRKSEKSIS LEVLQQYFSG SLKEAAKSLG VCPTTMKRIC RQHGISRWPS 540 RKINKVNRSL SKLQRVIDSV QCAEGTFGLG SLTTSQIPVS VGSHPSSLNR SNKQTSPSFK 600 VSEPQEKNGS STFKMLDEQA AIGDQLLRGR MLSPQKVIHD QSRSPPEHGK SSNSSKTRSR 660 SCEESAGTPN SQDSCQGSPP NESTLVGHPY VSAINEQCVN VEGSPESPYQ LTAAPNISPT 720 NSIPDAFLMT EPQELFGGIL IEDSGSSKDL RNLCPSVADA MVDEQVPEFC STNPPCPSLA 780 SNQPIPSLVH KISHVTARNE MKSVIIKATY GDDIIRFRIS LNSGMLELKE EAAKRLKLEV 840 GTFEIKYLDD DHEWILIACD ADLQECMDIS RSAGSNMIRL LVQDVMPNLG SSWESSGD

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MGTPYLETEK PMEKDDIMMF PSPLVGQLPL DNPDGYFVSK ERMMQALRHF KDMTEQNVLA  60
QIWAPVKDGS RYVLTTSGQP FLIGTLGNGL HQFRAASVRY KFAVSEDGAL GLPGRVFRQK  120
FPEWTPNVQY YSCKEYPRRV HAQCFNVQGS LALPVFEPSG QSCVGVVELI MNSSKINYAP  180
EVDKVCKALE AVNLRSSEIL DHPNTQIYNE GRQNALAEIL EILAVVCEAH KLPLAQTWVP  240
CENHSVLAHG GALKKSCASL NGSCMGQVCM STTDVAVYVV DPHMCGFREA CIEHHLQKGQ  300
GVAGRAFLSH NSCFCENITQ FCKTEYPLVH YARMFGLTSC FAICLRSTHT GDDDYILEFF  360
LPPSTTDLYE QQILLGSLLE MMKQHFQSLK IASGIELEGE VSVEIIQVST DGIVDSRLES  420
VRITQSMKSP PGPDSLHIVE DMVQLDSSKQ QLRVHLNDMN NKGIVASNAG GRLDQFSSLE  480
NEDMKKISER RRRKSEKSIS LEVLQQYFSG SLKEAAKSLG VCPTTMKRIC RQHGISRWPS  540
RKINKVNRSL SKLQRVIDSV QCAEGTFGLG SLTTSQIPVS VGSHPSSLNR SNKQTSPSFK  600
VSEPQEKNGS STFKMLDEQA AIGDQLLRGR MLSPQKVIHD QSRSPPEHGK SSNSSKTRSR  660
SCEESAGTPN SQDSCQGSPP NESTLVGHPY VSAINEQCVN VEGSPESPYQ LTAAPNISPT  720
NSIPDAFLMT EPQELFGGIL IEDSGSSKDL RNLCPSVADA MVDEQVPEFC STNPPCPSLA  780
SNQPIPSLVH KISHVTARNE MKSVIIKATY GDDIIRFRIS LNSGMLELKE EAAKRLKLEV  840
GTFEIKYLDD DHEWILIACD ADLQECMDIS RSAGSNMIRL LVQDVMPNLG SSWESSGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein