PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900787.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 211aa MW: 22294.2 Da PI: 8.3496

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.1	2.2e-36	51	149	6	89
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 r+ ++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tg+++ +a+ ++++s s+s++s + XP_023900787.1 51 PRTRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGSGTVPATTSSTSSPTLSSSAHSVPcriqplsavsgg 145 699*********************************************************99888666555555555555555666666666664 PP TCP 89 ...k 89 XP_023900787.1 146 lgmF 149 3330 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MGSDMVLHFS EQDPTKQVPP TPASTAAAAA AAAATAKTTA PKTQVSALSL PRTRDRHTKV 60 NGRGRRVRMP ALCAARIFQL TRELGHRSDG ETIEWLLRQA EPSIIAATGS GTVPATTSST 120 SSPTLSSSAH SVPCRIQPLS AVSGGLGMFS MAQPQPSQQP SCRLDLCQPM GLDYAAAASN 180 GYRHMPFTAL LLQPTATEEA EEKQREEVLG D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	5e-38	TCP family protein