PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900894.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 281aa    MW: 30292.6 Da    PI: 4.7955
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.5e-11162209455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_023900894.1 162 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 209
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDPPLVSESS FSAANPEAYS LDELWPFGGS EPGTGSLGLR MCNLGPNPNG FAESSGNRDG  60
SAEESTVTEQ SGGGRKKRKE VSSEDESSKM VSTSSANDLL SESNGKRKKV AGSCDDNDGL  120
KAEVEASSAA DNKPAEGSTQ PSEPPKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI  180
LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE AVNSRMGMNP VLDGFPPKDL  240
GAQPFDASGM IFGSQSMREY AQSSQPEWLH MQVGGSFERA T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17580RKKRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.14e-92bHLH family protein