PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900904.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 278aa    MW: 30714.8 Da    PI: 6.9846
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer987.2e-3164120259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +++rY+eClkNhA  +GghavDGCgEf+++ geegt +alkCaAC+CHRnFHR+ev++
  XP_023900904.1  64 MTTRYRECLKNHALGMGGHAVDGCGEFLAA-GEEGTLDALKCAACNCHRNFHRKEVND 120
                     5789*************************9.999*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MEFEEVEEEE HEEEEDMEIP TPPAPAYELP VTNSASGKPK VLVGPNNNNN NNNHPTTSSA  60
TTMMTTRYRE CLKNHALGMG GHAVDGCGEF LAAGEEGTLD ALKCAACNCH RNFHRKEVND  120
HHHHHQRSSS EVYHHYQQQF TPYYHHHHRS PQPPHHSGYL HMTPTLSQHH QRPPLALPAA  180
SGGGGQDLED MSNPSSSGGG GGGGGGGTSS GGGSKKRFRT KFSQEQKEKM LQFAESLGWR  240
IQKHDEAAVD QFCADTGVRR QVLKVWMHNN KHTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-63ZF-HD family protein