PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901003.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Nin-like

Protein Properties

Length: 1483aa MW: 164982 Da PI: 6.3522

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89	3.9e-28	686	736	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ XP_023901003.1 686 EKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 736 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1483 aa Download sequence
MDPPIKQAKG FIVLHESSSS SSSSSSSSRV LDRKSVIFSA VQHKYIQTYI TTSSLKTSYT 60 VYKTLTSVQS PCEMEIERKL NMEYSDFTPN NSTAYGNFSD NNTMASDFMG ELLSEGCWLE 120 TSTGGFNLLP PAPLPTTTTS RALNDPSHYY LPSLDSNPHQ QIYQEDQTEG AFPESESILV 180 DGNELGRRWR IGPRANPGPC SSVKERLVLA VGYLKECTKI MNVLIQIWVP IRKGGRYFLS 240 TYDQPYSFDP NSKSLADYRN VSRAYQFTVE EDREESVGIP CRVFLGRLPE WTPDVRFFKR 300 DEYPRISYAQ QYDIRGSLAL PVFERGSGTC LGVVEIVTTT QKINYRPELE HVCQALEAVD 360 LRSSQYFSPP TVKACDELYH AALNEIVEVL TSVSKTHRLP LALTWAPCVQ QGKGGCRHSD 420 ENFAHCVSTV DTACYVADLE VLGFLEACSD YHLFRGQGTV GTAFTTTKPC FATDITAFSK 480 TEYPLSHHAR MFGLHAAVAI PLRSIYTGSA DFVLEFFLPK DCQDPEEQKQ MLNSLSIVLQ 540 QARRSLHAVV EKELEEEEIL YPVKEVVVAS DGKPTSSTTT NLKEAYSKES SWVAHMMEAQ 600 QKGKGLSIPL EYQEEEPNEE FKMTTHWDST QVGLRSGQAF SDSGAQLQQS SESKGSAEGG 660 GDSYSYGGRQ SSGGRKAGEK RRTKTEKTIS LPVLRQYFAG SLKDAAKSIG VCPTTLKRIC 720 RQHGITRWPS RKIKKVGHSL RKLQLVIDSV QGAEGSIQIE SFYNSFPELS SQQANSPISS 780 LNMSDSKDPH SKQESGLFSF GSGPLRSPAS SCSQTSSPSI YCTTGVEQHS TSINALSSAD 840 TLITENLGGI LHGACSDAEL HALNLQQEPN LIHRVENLKS FGEHPGLETL SCLPGSSSQN 900 SRDGGAFRVK ATFGDEKTRF SLHPNWSFGA LQLEIARRFN LDDVSRVDIK YLDDDREWVI 960 LTCDADLQEC MDLFRASQSH TIRLSLQHAY KIHTAPRPSL TNVPALNYLL RSEIYVSEDG 1020 QLRSVPLILG YTPKKADVQP AGNAITEGDY RLRRIDVARK NFIAPYDLAP VPHPNPQGED 1080 EGGVQIIPSD SEEELDRQSC VRPPLLLTTV PEDSSEEEMS DLRLLLKRRS NKVEVKGTGT 1140 SRPEANLPPP PPAPQVPDPA LKPIPDLKKK RPMEPEDKEK GLPPKNKQQK VVKEPRQKRA 1200 SSVESREEPP LAEVRRGQRI WSPRLELDGV PFPWETSVRN YDGGRAGLIA EALQQPLLLP 1260 RDMDSYRRFS QYELFKSLKR DLAMITQQVF VAEEWNRKTH VEAQAEAQAR SEAERALDSL 1320 KGEISKLSEQ LKGVAQERDS LDAGLKNAES QAESQRRQLS ETQKNLAAER ETTKALHAEL 1380 LKAKKAAEEA QRDVQLAKEA TEAEKRASFQ LGVETTEKGL TEQFAAVARD YCDLTWGKAL 1440 DAAGVPLDSN LNCQKISFMA KIFGSIQMMM SPLHNSQRHL SCP

Sequence ? help Back to Top

Protein Sequence Length: 1483 aa Download sequence

MDPPIKQAKG FIVLHESSSS SSSSSSSSRV LDRKSVIFSA VQHKYIQTYI TTSSLKTSYT  60
VYKTLTSVQS PCEMEIERKL NMEYSDFTPN NSTAYGNFSD NNTMASDFMG ELLSEGCWLE  120
TSTGGFNLLP PAPLPTTTTS RALNDPSHYY LPSLDSNPHQ QIYQEDQTEG AFPESESILV  180
DGNELGRRWR IGPRANPGPC SSVKERLVLA VGYLKECTKI MNVLIQIWVP IRKGGRYFLS  240
TYDQPYSFDP NSKSLADYRN VSRAYQFTVE EDREESVGIP CRVFLGRLPE WTPDVRFFKR  300
DEYPRISYAQ QYDIRGSLAL PVFERGSGTC LGVVEIVTTT QKINYRPELE HVCQALEAVD  360
LRSSQYFSPP TVKACDELYH AALNEIVEVL TSVSKTHRLP LALTWAPCVQ QGKGGCRHSD  420
ENFAHCVSTV DTACYVADLE VLGFLEACSD YHLFRGQGTV GTAFTTTKPC FATDITAFSK  480
TEYPLSHHAR MFGLHAAVAI PLRSIYTGSA DFVLEFFLPK DCQDPEEQKQ MLNSLSIVLQ  540
QARRSLHAVV EKELEEEEIL YPVKEVVVAS DGKPTSSTTT NLKEAYSKES SWVAHMMEAQ  600
QKGKGLSIPL EYQEEEPNEE FKMTTHWDST QVGLRSGQAF SDSGAQLQQS SESKGSAEGG  660
GDSYSYGGRQ SSGGRKAGEK RRTKTEKTIS LPVLRQYFAG SLKDAAKSIG VCPTTLKRIC  720
RQHGITRWPS RKIKKVGHSL RKLQLVIDSV QGAEGSIQIE SFYNSFPELS SQQANSPISS  780
LNMSDSKDPH SKQESGLFSF GSGPLRSPAS SCSQTSSPSI YCTTGVEQHS TSINALSSAD  840
TLITENLGGI LHGACSDAEL HALNLQQEPN LIHRVENLKS FGEHPGLETL SCLPGSSSQN  900
SRDGGAFRVK ATFGDEKTRF SLHPNWSFGA LQLEIARRFN LDDVSRVDIK YLDDDREWVI  960
LTCDADLQEC MDLFRASQSH TIRLSLQHAY KIHTAPRPSL TNVPALNYLL RSEIYVSEDG  1020
QLRSVPLILG YTPKKADVQP AGNAITEGDY RLRRIDVARK NFIAPYDLAP VPHPNPQGED  1080
EGGVQIIPSD SEEELDRQSC VRPPLLLTTV PEDSSEEEMS DLRLLLKRRS NKVEVKGTGT  1140
SRPEANLPPP PPAPQVPDPA LKPIPDLKKK RPMEPEDKEK GLPPKNKQQK VVKEPRQKRA  1200
SSVESREEPP LAEVRRGQRI WSPRLELDGV PFPWETSVRN YDGGRAGLIA EALQQPLLLP  1260
RDMDSYRRFS QYELFKSLKR DLAMITQQVF VAEEWNRKTH VEAQAEAQAR SEAERALDSL  1320
KGEISKLSEQ LKGVAQERDS LDAGLKNAES QAESQRRQLS ETQKNLAAER ETTKALHAEL  1380
LKAKKAAEEA QRDVQLAKEA TEAEKRASFQ LGVETTEKGL TEQFAAVARD YCDLTWGKAL  1440
DAAGVPLDSN LNCQKISFMA KIFGSIQMMM SPLHNSQRHL SCP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1123	1133	RLLLKRRSNKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein