PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901031.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YA
Protein Properties Length: 345aa    MW: 38519.2 Da    PI: 8.5668
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.24.8e-32166222158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVN KQy++Il+RRq Rakle+++kl +ksrkpylheSRh hAl+R+RgsgGrF
  XP_023901031.1 166 DEPIYVNKKQYHAILRRRQFRAKLEAQDKL-IKSRKPYLHESRHLHALNRARGSGGRF 222
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MGREAKCRNP TELQVQQSSM SRNLSLKMGN PPQHCHNTEQ LNFQFQDQDS PSTQSTGQSY  60
PEVVSMQESN PCGQGIVSPK SVFIETKGKA IGGITRQFSL MGTQDIVFSS SKLDHSQSIA  120
CLQFPYSDPY YSLFAATFGH QAIMHPSQMI GMATARVPLP LGFPDDEPIY VNKKQYHAIL  180
RRRQFRAKLE AQDKLIKSRK PYLHESRHLH ALNRARGSGG RFLNKKKLEE SNHTPTSHGL  240
DDSGSPKLHL FANMSESEVH QPENYRDRAS TTSCSDVTSV SNSDDIFQQP EFRFSGYPPH  300
IGGTMHSHSV DMLRVASKQH RLTVLRSPSS SSIFCGEDGC CNLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.18e-63NF-YA family protein