PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901122.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 275aa MW: 31971.2 Da PI: 7.7925

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.5	3.4e-36	25	116	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e++++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkk+ +++ weF++++F+kg k+ll++ XP_023901122.1 25 FLTKTYQLVDDPRTDHIVSWGEDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKIVSDR---------WEFANEYFRKGAKHLLSE 110 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ XP_023901122.1 111 IHRRKT 116 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MAFTMERCEE MVFSVESQKT VPAPFLTKTY QLVDDPRTDH IVSWGEDETT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFKKIVS DRWEFANEYF RKGAKHLLSE IHRRKTPQHH 120 HQQYYHDQPH QFFQPDDNAA WFDSPLPSPK PNTDILTALT EDNQRLRRKN FMLLSELAHM 180 KNLYNDIIYF IQNHVKPVPL DQRNSHAIPK LIELDSLCEA QNVVGVHGAK GCNLGNKSLV 240 TSTEDTNSTV KLFGVPLSGK KRLHSEELKF GVSNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	5e-86	HSF family protein