PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901336.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 352aa    MW: 39029.5 Da    PI: 6.6866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-08196243455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    sk    a +L + +++++sLq
  XP_023901336.1 196 SHSLAERARREKINARMKLLQELVPGC----SKISGTALVLDEIINHVQSLQ 243
                     8*************************9....788889999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEPNSASYVP GSCPTRPEPE ETGLEFLQFR DEIQRLMTVP PENASSFMAL LELPATQAMQ  60
LLHSSPHSAA GGGDEHKRHS SSSFTNGNLT FPSNKALIER AAKFSVFAAA AEISPETSSV  120
PSNSSANSDK VKTEPAETDS NPGSSNKTQT QKLAKRKERQ KKGKESAKKS KNESREDAEK  180
LPYVHVRARR GQATDSHSLA ERARREKINA RMKLLQELVP GCSKISGTAL VLDEIINHVQ  240
SLQRQVELLS MRLAAVNPRI DFNFDSVFAT EGGPLIDGNI PSMVSPLMWP ENPFTENRQN  300
FQQQWNFDAV HQPLWGREEE NHTFITPENS LFSYDSSANS ASLHSNQLKM EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.25e-91bHLH family protein