PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901425.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 226aa    MW: 24676 Da    PI: 7.4383
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding361.6e-112351247
                     HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +++a++ +G++ W+tIar ++ gRt++ +k++w++ 
   XP_023901425.1  2 IIRAHAWFGNK-WATIARLLN-GRTDNAIKNHWNST 35
                     6889999****.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MIIRAHAWFG NKWATIARLL NGRTDNAIKN HWNSTLKLKC SSMGDDFNDD VSNPQPLKQS  60
ASVVAATVTG TGLYLNPSSP SESDLSDSSM PATSPSYVFR PVARAVSLVP AHPVETLCST  120
TTDPPTSLSL SLPGSDPFEL ISPAQLVTPL PPQQQQQPPP PPPPKQPVTG YEKQFFSNEF  180
LAVMQEMIRK EVRNYMSGIE QNGFCNLQTD AIRNAVIKRI GISKIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.11e-29MYB family protein