PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901441.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 945aa MW: 105903 Da PI: 6.2975

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	168	1.5e-52	21	136	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e +krwl++ ei+ iL+n++++ l++e+++ p+sgs++L+nrk +r frkDGy+w kk+dgktv E+hekLKvgg evl+cyYah+een++fqr XP_023901441.1 21 TEaQKRWLRTAEICGILQNYKNFPLAAEPANMPPSGSFFLFNRKELRCFRKDGYNWTKKRDGKTVMEAHEKLKVGGSEVLNCYYAHGEENKNFQR 115 4449***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+ywlL+eel+++vlvhy+ev XP_023901441.1 116 RSYWLLQEELSHVVLVHYREV 136 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence
MAKGRHSGLG NPLINANQIV TEAQKRWLRT AEICGILQNY KNFPLAAEPA NMPPSGSFFL 60 FNRKELRCFR KDGYNWTKKR DGKTVMEAHE KLKVGGSEVL NCYYAHGEEN KNFQRRSYWL 120 LQEELSHVVL VHYREVEGNR TNDSCIKETE EAFPYFQETE PNSEMDGYVS SCFHPNNSQV 180 TSQTIDTTGL NSAQALEHMD AESACNHQAS SGFHLSFKFQ QPMVEKMNPG LSDPFLPASI 240 PNYYQGEFST VSGVDFGSLA QADKAKYSNN MRQILDSPPS DDDLGNGTSG NQAVPFWPSF 300 PETQPDTNGL LLERENLILG QHFTSNFVER WEFSSHPQIQ NEWQTSEGNW PLNQNVHPES 360 EYGATSLFHE QDVNLDEQFN FQESCLLQTD NQEIHPMQNN LQVQLSDADH GCKTALEGKI 420 DFAILNQWMM SDEVECLFKH NKYADTTDNY SGKTSGIFLL RFEKLLSLTS VCPPSADFIS 480 VSKKSEVRSK ISSLLEWEDE ERDQMLNVII NQKKEWHQIL ELASENDFSS KKVQKKLLKK 540 LLKEKLHVWL LQKEAEDGKG PSVLDEGGQG VLHLAASLGY DWALEPTIIA GVSVNFRDVN 600 GWTALHWAAF CGRERTVAFL VSLGADPAAL VDPCSKYPSG RTAADLASAN GHKGIAGYLA 660 KSHLNSHLSS LTLETGEGNA AGISGAKAVE TVSERSATPV SDRDLPYSLK DSLAAVCNAS 720 QAFARIHEDS RVKSFQKKQL KECGDGKFGM SDAQALSLLA LRTNKSGKHD LPVHAAAAIR 780 IQSKFRSWKG RREFLIIKQR MVEIQAQARQ HQVRKNYIKI IWLVGIVEKV ILRWKRKGGG 840 LRGFKAEALA EGHKMQDKSS EDDYDFLKEG RKQTEERLQK AHATVKSMAQ SREARDQYHR 900 LLNVLTNIQG SLVVGDGVPS SSDEMADYND LIEAFLDVDT NMPSS

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence

MAKGRHSGLG NPLINANQIV TEAQKRWLRT AEICGILQNY KNFPLAAEPA NMPPSGSFFL  60
FNRKELRCFR KDGYNWTKKR DGKTVMEAHE KLKVGGSEVL NCYYAHGEEN KNFQRRSYWL  120
LQEELSHVVL VHYREVEGNR TNDSCIKETE EAFPYFQETE PNSEMDGYVS SCFHPNNSQV  180
TSQTIDTTGL NSAQALEHMD AESACNHQAS SGFHLSFKFQ QPMVEKMNPG LSDPFLPASI  240
PNYYQGEFST VSGVDFGSLA QADKAKYSNN MRQILDSPPS DDDLGNGTSG NQAVPFWPSF  300
PETQPDTNGL LLERENLILG QHFTSNFVER WEFSSHPQIQ NEWQTSEGNW PLNQNVHPES  360
EYGATSLFHE QDVNLDEQFN FQESCLLQTD NQEIHPMQNN LQVQLSDADH GCKTALEGKI  420
DFAILNQWMM SDEVECLFKH NKYADTTDNY SGKTSGIFLL RFEKLLSLTS VCPPSADFIS  480
VSKKSEVRSK ISSLLEWEDE ERDQMLNVII NQKKEWHQIL ELASENDFSS KKVQKKLLKK  540
LLKEKLHVWL LQKEAEDGKG PSVLDEGGQG VLHLAASLGY DWALEPTIIA GVSVNFRDVN  600
GWTALHWAAF CGRERTVAFL VSLGADPAAL VDPCSKYPSG RTAADLASAN GHKGIAGYLA  660
KSHLNSHLSS LTLETGEGNA AGISGAKAVE TVSERSATPV SDRDLPYSLK DSLAAVCNAS  720
QAFARIHEDS RVKSFQKKQL KECGDGKFGM SDAQALSLLA LRTNKSGKHD LPVHAAAAIR  780
IQSKFRSWKG RREFLIIKQR MVEIQAQARQ HQVRKNYIKI IWLVGIVEKV ILRWKRKGGG  840
LRGFKAEALA EGHKMQDKSS EDDYDFLKEG RKQTEERLQK AHATVKSMAQ SREARDQYHR  900
LLNVLTNIQG SLVVGDGVPS SSDEMADYND LIEAFLDVDT NMPSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	531	540	KKVQKKLLKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-124	CAMTA family protein