PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901488.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-YB

Protein Properties

Length: 196aa MW: 21536.6 Da PI: 4.2438

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	159.4	5.7e-50	47	139	1	93
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 v+eqdr lPianv+rimk +lP+naki+k+ake +qecvsefisf+tseas+kcq+ekrkt+ng+d+l+a+++lGfe+y e+lk+yl++yre XP_023901488.1 47 VKEQDRWLPIANVARIMKTALPENAKIAKEAKECMQECVSEFISFITSEASEKCQQEKRKTVNGEDILFAMTSLGFENYGEALKIYLARYREN 139 58*****************************************************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MSQSPPRDTE DVEPAPPSPD ENDPQPPEGM SRPDDAGDHA LGYDFEVKEQ DRWLPIANVA 60 RIMKTALPEN AKIAKEAKEC MQECVSEFIS FITSEASEKC QQEKRKTVNG EDILFAMTSL 120 GFENYGEALK IYLARYRENL VTRGDQKPLA GGSGSNPNTT LPSYDANHNA LSNPMESGTE 180 GNGEFTYGVG HTDGQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	9e-51	NF-YB family protein