PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901639.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 301aa    MW: 34717.3 Da    PI: 9.8318
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.15.8e-1713104199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +ps       l++p kf++e+g +   s+  +l+ + grsW v l  +k ++ +++ +GWk+Fv+ + ++ g f+vF+++g+s+f  +v 
  XP_023901639.1  13 FFKIILPSTIQHM-KLSIPEKFVREFGDE--LSTVSKLTLPYGRSWLVGL--EKVDKNIWFCDGWKDFVEYHSICYGYFLVFEYQGNSNF--HVL 100
                     7777766665555.5***********865..888899999**********..**********************************9999..*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     vf+k
  XP_023901639.1 101 VFDK 104
                     *998 PP
2B360.23.4e-192072921198
                     HHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  11 lksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     + ++++++p +fa +h  g++       +le+++gr+W+v++  r++ ++ + +++GW  F+++n+L+egD++vF+l++r+   l+v++fr
  XP_023901639.1 207 MHKHIMYIPVRFAIKHlcGSQ-----IAKLETPDGRQWSVNCHKRGRLSSaMNIGRGWIVFARENNLEEGDVCVFELIKRKPVVLNVSIFR 292
                     56789***********76544.....69**************665554445999**************************9999****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MAGRCKSRTP SHFFKIILPS TIQHMKLSIP EKFVREFGDE LSTVSKLTLP YGRSWLVGLE  60
KVDKNIWFCD GWKDFVEYHS ICYGYFLVFE YQGNSNFHVL VFDKTATEIQ YPLSKNCKLE  120
DQVVIMELDD ANISMHNKNE NEMSNSDDEL PANHKEVREK SVKKQISGMS SKGKLMMSRG  180
RERAIQAARR LRPKNPSFMG IIGRVNMHKH IMYIPVRFAI KHLCGSQIAK LETPDGRQWS  240
VNCHKRGRLS SAMNIGRGWI VFARENNLEE GDVCVFELIK RKPVVLNVSI FRVVDYALPV  300
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-30B3 family protein