PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901667.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 233aa    MW: 26609.8 Da    PI: 9.793
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.46.9e-151492281597
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      ++lp +f  ++g++    + +tl++++g++W v + y +  s ++ ++kGW  F k+n+L+  D++vF+++ r+   l v++f
  XP_023901667.1 149 YMYLPGEFSMNIGQN----QIVTLQTPDGKQWCVWCYYyKPPSLTMRMGKGWTAFSKDNNLEKCDVCVFEVITRKPVVLSVTIF 228
                     589999999777744....47***************76466666699***********************99888887888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MTKTRKSRVH NRNCDQPPSS SMAGRVRTPS NFFKIILPST IQDMKLTAIE IQYPPSKNSK  60
LEDQVDIIDL DDTNTSSHDM LNENEMSNSV ELPTKHKEVR EKFVGKKISG MSSKGKLMMS  120
RGKERTIQAA RMLKPKNASF VGIMLPSYYM YLPGEFSMNI GQNQIVTLQT PDGKQWCVWC  180
YYYKPPSLTM RMGKGWTAFS KDNNLEKCDV CVFEVITRKP VVLSVTIFHV VDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-16B3 family protein