PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901678.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 329aa    MW: 38345.2 Da    PI: 9.3623
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.46.1e-1938129199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +ps + + + l++pkkf++e+g++   s+  +l+ ++g  W+v l  +k ++++++ +GWk+F++ + ++ g f+vF+++g+s+f  +v 
  XP_023901678.1  38 FFKIILPSTMQQMK-LMIPKKFVREFGNE--LSTVAKLTVPHGHIWQVGL--EKADKSIWFCDGWKDFAEYHCICCGYFLVFRYEGNSNF--HVL 125
                     89999998888887.***********955..999****************..**********************************9999..*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     vf+k
  XP_023901678.1 126 VFDK 129
                     *998 PP
2B358.99.4e-19227317698
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     ++ ++ +++ +++p  fa ++  +    +  +le+++gr+W v++ yr +s++ + +++GW  F+++n+L+egD++vF+l++r+   l+v++fr
  XP_023901678.1 227 IQLYNIRNRYMYVPAGFAFKYLRQ---RQIAKLETSDGRQWPVNCYYRETSCSaMNIGRGWIVFARENNLEEGDVCVFELIKRKPVVLNVSIFR 317
                     57899999**********999544...3479**************99999999888***************************9999****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MMVAKSKAHR SRMVPNWNYY HHQQPSSSMT ARTVPSHFFK IILPSTMQQM KLMIPKKFVR  60
EFGNELSTVA KLTVPHGHIW QVGLEKADKS IWFCDGWKDF AEYHCICCGY FLVFRYEGNS  120
NFHVLVFDKT TTEIQYPLSK NCHLEDQVEI VELDDAYISM HDKLNENEIS NSEQFPSKHE  180
EVKEKFVKKK FSGTSSKGEL MMSRGGERAI QAARTFKPKN PSFMGIIQLY NIRNRYMYVP  240
AGFAFKYLRQ RQIAKLETSD GRQWPVNCYY RETSCSAMNI GRGWIVFARE NNLEEGDVCV  300
FELIKRKPVV LNVSIFRVVD YAHNALLVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-55B3 family protein