PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901724.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 292aa    MW: 33359 Da    PI: 8.1308
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.85.9e-1138129199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +ps + +++ l++p kf+ ++g +   s+  tl  + + +W+v l   k  + +++ +G + F + + + +g  +vFk++g+s+f   v 
  XP_023901724.1  38 FFKIILPSTMQQLK-LSIPPKFVIDFGDE--ISTSATLSVSCSGTWKVGL--LKAENNIWFCDGLEYFFEYHTISAGHLLVFKYEGHSNF--DVI 125
                     899*********98.********999866..788899999**********..99999****************************99999..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+k
  XP_023901724.1 126 IFDK 129
                     8887 PP
2B351.42e-16193286499
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                     vl ++++ + + +++pk fa++h      ++ + l+++  ++W+v++ +++ +s+++ l+ GW  F ++n L+egD++vF+++++     ++v++
  XP_023901724.1 193 VL-QPYNIRFKYVYVPKGFANKHVAW---NQFVNLQTSGEKQWRVRCyCHTSTSSAMRLGMGWAAFSSDNYLEEGDVCVFEVIKTsPAVLMKVSI 283
                     44.7788888889*******999433...236***************334777778*************************99987777788888 PP

                     E-S CS
              B3  97 frk 99 
                     fr+
  XP_023901724.1 284 FRA 286
                     875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MMVAKSKAPR TRMAPNWNYD HHQQPSSSRT ARTVPSHFFK IILPSTMQQL KLSIPPKFVI  60
DFGDEISTSA TLSVSCSGTW KVGLLKAENN IWFCDGLEYF FEYHTISAGH LLVFKYEGHS  120
NFDVIIFDKT ATEIQYPSCK NDISEELEDM VELDDSDMSR QDRQPSDTSS KGRERAIQAA  180
KMSMPKSRSF MTVLQPYNIR FKYVYVPKGF ANKHVAWNQF VNLQTSGEKQ WRVRCYCHTS  240
TSSAMRLGMG WAAFSSDNYL EEGDVCVFEV IKTSPAVLMK VSIFRAHDYA VN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-26B3 family protein