PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901746.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-YB

Protein Properties

Length: 269aa MW: 28948.4 Da PI: 4.0363

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	53.4	6.4e-17	35	127	5	97
NF-YB 5 drflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 + lP + ++r+ k vlP n++i kda +++ ++ f+s+++s+++++++ +++kti++ d++ al + +e ++ l++ lkky +++ ek XP_023901746.1 35 ELTLPKSMIARLAKGVLPPNTQIQKDALLALHKSATVFVSYIASNSNENARSNNKKTIAPADVIAALKDAELESFLPRLEAELKKYNDIQCEK 127 5679999*********************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MPPRKSNVSA VSNGPEDATE SPAPKAAKDG MSIEELTLPK SMIARLAKGV LPPNTQIQKD 60 ALLALHKSAT VFVSYIASNS NENARSNNKK TIAPADVIAA LKDAELESFL PRLEAELKKY 120 NDIQCEKRNT YRRKVKEEKA GTSAVAAENP VSADQEPMAH VQSAKVVANG HVDDAARPAK 180 KLRMESGGAV IPSREAAEEG GGSDDEVEEE DEGPEDEEVE EEDEEEDEGD EDEEDGDTRL 240 DETMEEEEAG GGEAVSGMRD EALDEPDSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.3	5e-12	NF-YB family protein