PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902084.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 237aa    MW: 27493.3 Da    PI: 8.4611
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.83.9e-34281192102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y ++ed+ ++++isw+ +g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++         weF ++ F+kg+kell++
  XP_023902084.1  28 FLLKTYMLVEDPVTDDVISWNVEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNR---------WEFCNDMFRKGEKELLCE 113
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_023902084.1 114 IRRRKA 119
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MLYNNSNMEG MCEKGLLEYV RKSSPPPFLL KTYMLVEDPV TDDVISWNVE GTAFVVWQPA  60
EFARDLLPTL FKHSNFSSFV RQLNTYGFRK VATNRWEFCN DMFRKGEKEL LCEIRRRKAW  120
SNKQQPVAPT QSTPQEFDED QRSSSTSSSS GFSTLIDENK RLKKENGVLN SELLSMKKKC  180
KELLDLVAKY AHSEKEEEDE RPKLFGVRLE VPGEREMKRK RAEIRESASI LLSQSCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.11e-68HSF family protein