PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902085.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 230aa    MW: 26656.4 Da    PI: 8.4668
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.93.7e-34211122102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y ++ed+ ++++isw+ +g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++         weF ++ F+kg+kell++
  XP_023902085.1  21 FLLKTYMLVEDPVTDDVISWNVEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNR---------WEFCNDMFRKGEKELLCE 106
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_023902085.1 107 IRRRKA 112
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEGMCEKGLL EYVRKSSPPP FLLKTYMLVE DPVTDDVISW NVEGTAFVVW QPAEFARDLL  60
PTLFKHSNFS SFVRQLNTYG FRKVATNRWE FCNDMFRKGE KELLCEIRRR KAWSNKQQPV  120
APTQSTPQEF DEDQRSSSTS SSSGFSTLID ENKRLKKENG VLNSELLSMK KKCKELLDLV  180
AKYAHSEKEE EDERPKLFGV RLEVPGEREM KRKRAEIRES ASILLSQSCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.18e-69HSF family protein