PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902237.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 171aa    MW: 18971.6 Da    PI: 6.7603
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44e-1173120455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_023902237.1  73 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 120
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
FSVTVFIHLE QSESNGKRKK VAGSCDDNDG LKAEVEASSA ADNKPAEGST QPSEPPKQDY  60
IHVRARRGQA TDSHSLAERA RREKISERMK ILQDLVPGCN KVIGKALVLD EIINYIQSLQ  120
RQVEFLSMKL EAVNSRMGMN PVLDGFPPKD VSLYTLIDCL TYMSSQCDCP K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.22e-60bHLH family protein