PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902256.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 236aa    MW: 26209.9 Da    PI: 9.9222
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-2053102255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f tae Aa a+++a+++++g
  XP_023902256.1  53 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAESAALAYDEAALRFKG 102
                     7********.**********9...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSVMVSALAQ VISNTDQNPV QVHGNPIITS QSGPREQHQS QPAVDQGNTR RRHYRGVRQR  60
PWGKWAAEIR DPNKAARVWL GTFETAESAA LAYDEAALRF KGSKAKLNFP ERVQGTSETG  120
YLTTGLGTEQ VPNQILHHAP HQTTSQQTYP NMFQYAQLLQ TGDSSLHYVN VPSLYGQERF  180
ASQTSSTTTS SSSSSSSPMP TQQQQQYQQQ ELLRFPTHFG GGSPTSSNPR KNMKDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.19e-38ERF family protein