PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902679.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 473aa    MW: 50337.6 Da    PI: 9.767
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.5e-12219260145
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLe 45 
                     r++ah+ +ErrRR+++N+ f  L+e++P +   +++ + K +iL+
  XP_023902679.1 219 RKTAHSLIERRRRSKMNEEFGVLKEMIPAC---KGQEMHKLAILQ 260
                     799***************************...***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    
MATGQHPHPA ATPSPPPRPP SQPIRRPAHI FPTPLPSPVL ASYAEHIFYA RRPLPDTSLK  60
AAHHHPIAMP RPHPPPTPGS SSDLRGREGS FVAPTVSLPP AAYQDQDRAS SSSTPSANGS  120
DSSYRPVSPT SPADLARKRT AHQAGGVITK DDFALPPPPT RSRKIIQMKP RENESQEQFS  180
ASATASPQVV GKTPSAAPQA GKRKQANSGT TAAGRKIARK TAHSLIERRR RSKMNEEFGV  240
LKEMIPACKG QEMHKLAILQ AQNHSPHSQA LPAAPARATQ DDEDEDEDEE MEDDTHGDAG  300
TSTPATAGLE PSNSRVSLPS LSQITTTSTN TNSPSVFSAG AGRHYSISST SQASYSPYFH  360
SNQTSPAFGP QLTHVGNAPS YGNFGLGSPA LKPVDSAHHL RQIAEGATEL SEKQRSALKS  420
GASAGGRSEK DLDHEATAAL LMLNNDRRNW RTGQDSESMR TSTGMSVRDL LSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219231RKTAHSLIERRRR