PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902960.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 446aa    MW: 48337.9 Da    PI: 9.5022
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-13365415152
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIk 52 
                     +r++h + E++RR+ i+++++ L +++P+ a   +++  lsKae L++A+ YI 
  XP_023902960.1 365 KRENHIKSEQKRRNIIKQGYNDLNRMVPSlA---GGRSgLSKAELLKEAIMYIE 415
                     79***************************55...77778**************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MDPGIKQEHE SYDNPYAFGD GSAMLSNHFG SAQAGAQRPQ SHASNYYPSG QSQVHGAYDD  60
SSAAHSLLGM SNPQHSQAAM SWGNFSAPNG LPEASATFTA TLPNFNASNM RANNPYNQPA  120
GFSLNQQVYH QDASQHLARS SRTPQPRHQD PANFFHFGHT GTPTPSTSTR TPNLGVLEAR  180
FGTDDSFGST GYRGSIRNTE HEKYANLNSM PLADRAAAYT PDGQPLAVQR RESAYNLDTG  240
GERSQSAKRR KTKLESEEDE DYLPERKASE AIPKRGPQTL KSLETSRTTP NKIAGPRRKS  300
APNIASARPP STARSYNNDS PSPDAVGSLS PGDSGDMNST KKRQRARGSD AGAAPGRQNL  360
SDEQKRENHI KSEQKRRNII KQGYNDLNRM VPSLAGGRSG LSKAELLKEA IMYIEECVMG  420
NKALAYLLPS IHKSEDAQIG TTSVSS