PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023903336.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 230aa    MW: 25347.2 Da    PI: 4.3971
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023903336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-1774123154
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     + y+GVr++   g+WvAeI++p   + r k+ +lg+f+ta++Aa a+++a+++++
  XP_023903336.1  74 CNYRGVRQRT-LGKWVAEICEP---N-ReKKLWLGTFDTADDAASAYDEAARAMY 123
                     56*****999.8******9998...3.46**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGYLDQGVPM ESSKKRKTRG DGFSVAETLA KWRDHNAQLL ESSGDDVKRA RKLSYKGPKK  60
GCMKGKGRAE NLQCNYRGVR QRTLGKWVAE ICEPNREKKL WLGTFDTADD AASAYDEAAR  120
AMYAAAARLN FPESVSTMSG PTPAGYEASV GESTSSLVKD ESTDNGQEEL LAFFENELFD  180
VAELMALLEN NLDFTDSVLD FGFDVNQLGF PDTEADLPSL VDTEGRDEPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.12e-22ERF family protein