PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023903384.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 216aa    MW: 25086.9 Da    PI: 10.4485
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023903384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.83.9e-1389193192
                     EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--.TT-EEEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLk.egDfvvF 82 
                     f+k+l ++  lk+ rl+l+k+ +++            +++ ++++ +t +d +g  + ++++  ++k++ry+ltkGW +F++++gL+  +Dfv++
  XP_023903384.1  89 FEKQL-QEKELKEYRLYLSKTAVTKLlfpllrteelrDNVIRQGIPVTAYDVQGIAFPMQFKQsTGKQKRYMLTKGWTRFCNQHGLRaFKDFVTL 182
                     78888.899999999********999****9999999777789999***************776888888*****************779***98 PP

                     EE-SS.SEE.. CS
              B3  83 kldgr.sefel 92 
                      + ++ ++ +l
  XP_023903384.1 183 WMFRHkETDRL 193
                     75554355544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MGKGSRASTS KDHEDSATTL EAQNKNKKRK CVVDNGRATS NPKPKENAKP EGLQISLESH  60
IYAYELPKMP PVPRNIGSLV KNNRCSTPFE KQLQEKELKE YRLYLSKTAV TKLLFPLLRT  120
EELRDNVIRQ GIPVTAYDVQ GIAFPMQFKQ STGKQKRYML TKGWTRFCNQ HGLRAFKDFV  180
TLWMFRHKET DRLCFVISFR TFDYLDHGIK QRIINN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.12e-14B3 family protein