PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023903436.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 343aa    MW: 40032.8 Da    PI: 7.1074
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023903436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR176.55.4e-2429117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY+k++GFs+rk++ +  k++g +t+r+fvC keg r+++k++ ++ +++r+etr+g +a+l++ +++ ++k++v+++ +eHnH l
  XP_023903436.1  29 DFYNEYGKKAGFSIRKEYVNIWKKTGVVTSRRFVCVKEGVRAKDKRD-QNVKNPRVETRCGSEAHLVIVLNRdSKKYVVSEFISEHNHYL 117
                     6*******************************************999.999******************99989**************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEVHVPSNVP MESTPFKRME FEGDEIAYDF YNEYGKKAGF SIRKEYVNIW KKTGVVTSRR  60
FVCVKEGVRA KDKRDQNVKN PRVETRCGSE AHLVIVLNRD SKKYVVSEFI SEHNHYLHLP  120
STVHMMPSQR KVAATHAIEI DLAHESGLRL KQSYELLSKQ GDARMIIDYS HFGDVITFDT  180
TYSKNRDARP LGIFLGLNHH RETVVFGGAL LYDEMIESFV WLFETFLEAM SKKKSVTIFT  240
DQDAVMSVAI KVVMPKTYHA LCSWHMWQNA EKHLGHLLKN EFQFNADFLA CIYEYDGEDE  300
FLTAWNEMLD KYDVHENKWL IDLFKLKEKW AQVYVKRTFT AVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-66FAR1 family protein