PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023903719.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Trihelix
Protein Properties Length: 245aa    MW: 27636 Da    PI: 9.2828
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023903719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.42.1e-1430113186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  + +Liea  ++  +l+rg+l++++W+ev++++  r+ g+  +++ +qCk++++ l+k+yk +k+ +        s++p++ +l+
  XP_023903719.1  30 CWSEGATETLIEAWGDRYVQLNRGNLRQKDWKEVADAVnnRQNGVkpRKTDIQCKNRIDTLKKKYKVEKAKQPP------SKWPFYYRLH 113
                     7*************************************9977788656799****************9999886......5799999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDRPGPRHAT RPSPGSGSGS GGGGGGREDC WSEGATETLI EAWGDRYVQL NRGNLRQKDW  60
KEVADAVNNR QNGVKPRKTD IQCKNRIDTL KKKYKVEKAK QPPSKWPFYY RLHSLIGAAN  120
AVDKKPTTVT FTVKPKSNPN PTPTDSDDDE DDEEDDVVVR KNGVESVGFS DGAACKELAR  180
AILKFGEIYE RIESSKQQQM MELEKQRMEF TKDLEFQRMN MFMDAQLEIE KSKRAKYSPS  240
SGKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.11e-70Trihelix family protein