PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023903740.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 250aa MW: 27233.4 Da PI: 6.2558

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023903740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.3	4.2e-19	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT++Ed l ++v+q+G+++W++I++ ++ gR++k+c++rw + XP_023903740.1 15 KGSWTPQEDATLMKLVEQHGPRNWSLISQGIP-GRSGKSCRLRWCNQ 60 799***************************.*********985 PP
2	Myb_DNA-binding	53.3	6.4e-17	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed ++ +a++ +G++ W+tIar ++ gRt++ +k++w++ XP_023903740.1 69 PFTPAEDAIIFQAHAVHGNR-WATIARLLP-GRTDNAIKNHWNST 111 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MMMKMENGGG GDRIKGSWTP QEDATLMKLV EQHGPRNWSL ISQGIPGRSG KSCRLRWCNQ 60 LSPTVQHRPF TPAEDAIIFQ AHAVHGNRWA TIARLLPGRT DNAIKNHWNS TLRRRRGGNN 120 GSELESASSE SNSAVKRSDA VSSESDSGLK RQRLMGGSPE ENSDLVLGPQ TSLTLSLPGG 180 GGESVITLPA VDEKMKVTVE EENEEEEEEE TCLVTIMQKM IAAEVRNYMD SLKSQNGHGP 240 DCGPPAQKGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	9e-58	MYB family protein