PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023903808.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 386aa MW: 43301.1 Da PI: 4.3664

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023903808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.8	1.2e-35	42	133	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++e++ed+++++++sws+ nsfvv+d+++f++++Lp++Fkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_023903808.1 42 FLTKTFEMVEDPATDSIVSWSTARNSFVVWDSHKFSTTLLPRHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLAGQKHLLKT 127 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_023903808.1 128 IKRRRH 133 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEGVIVKEEE TVTYGVGSSS SSSSCISPQP MEGLHEVGPP PFLTKTFEMV EDPATDSIVS 60 WSTARNSFVV WDSHKFSTTL LPRHFKHSNF SSFVRQLNTY GFRKVDPDRW EFANEGFLAG 120 QKHLLKTIKR RRHVTQGTQQ QGGGACVELG QYGLEGELEI LKRDRGLLMA EIVRLRQQQQ 180 NSREQMIAME DRLQSTERKQ QQLMNFLAKA LNNPSFIQQF SQMSAQRRGL QGVEIGRKRR 240 LTASPSVENL QEEDVSVLAG SNQVVDFTSQ EQEEMATMET FFSAALDNES SSDINDPIAS 300 SVPTRSGTNL DSVNETIWEE LLNEDLITEN PEEEAVVGDK SEIDVEVEDL VAEPDDWGDD 360 FQDLVDQMVI SGSLANGNLY KEGIKH

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEGVIVKEEE TVTYGVGSSS SSSSCISPQP MEGLHEVGPP PFLTKTFEMV EDPATDSIVS  60
WSTARNSFVV WDSHKFSTTL LPRHFKHSNF SSFVRQLNTY GFRKVDPDRW EFANEGFLAG  120
QKHLLKTIKR RRHVTQGTQQ QGGGACVELG QYGLEGELEI LKRDRGLLMA EIVRLRQQQQ  180
NSREQMIAME DRLQSTERKQ QQLMNFLAKA LNNPSFIQQF SQMSAQRRGL QGVEIGRKRR  240
LTASPSVENL QEEDVSVLAG SNQVVDFTSQ EQEEMATMET FFSAALDNES SSDINDPIAS  300
SVPTRSGTNL DSVNETIWEE LLNEDLITEN PEEEAVVGDK SEIDVEVEDL VAEPDDWGDD  360
FQDLVDQMVI SGSLANGNLY KEGIKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	131	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-122	HSF family protein