PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023903997.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 494aa MW: 53041.6 Da PI: 6.5057

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023903997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	9.9e-40	131	191	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_023903997.1 131 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 191 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MSEAKDPAIK LFGKTIPVPE VQANGSGDCS GAPSSCSGPL VDDNIDQDRA SSSSSSAEKD 60 TIGEKPTANK KEDGGLPVSS EESTNPDGAS GISENPKTPS VEKESATLKA SKTEEEHSES 120 SNSQEKTLKK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV 180 GAGRRKNKNS ASHYRHITVS EALQNARVDL PNGVHHPSLT SNGTVLTFGS DTPLCESMAS 240 VLNLADKTMR NCTPNGIHKP EELRIPVPYG GGENGDDRSN GASVASSNQK DEPGKIGSQE 300 QVMQNSQGFA PQIPCFPGAP WPYPWHSAQW SSPVPPPAFC SPGFPMPFYP AAGYWGCTVP 360 GPWSIPWLPQ PTSPNHTALS SGPNSPTLGK HSRDENILKS SNSGDEEPLK ENNAERCLWI 420 PKTLRIDDPG EAARSSIWAT LGIKNDKADT ISGGGLFKAF QSKTDEKNHV AETSPVLQAN 480 PAALSRSLNF HESS

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MSEAKDPAIK LFGKTIPVPE VQANGSGDCS GAPSSCSGPL VDDNIDQDRA SSSSSSAEKD  60
TIGEKPTANK KEDGGLPVSS EESTNPDGAS GISENPKTPS VEKESATLKA SKTEEEHSES  120
SNSQEKTLKK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV  180
GAGRRKNKNS ASHYRHITVS EALQNARVDL PNGVHHPSLT SNGTVLTFGS DTPLCESMAS  240
VLNLADKTMR NCTPNGIHKP EELRIPVPYG GGENGDDRSN GASVASSNQK DEPGKIGSQE  300
QVMQNSQGFA PQIPCFPGAP WPYPWHSAQW SSPVPPPAFC SPGFPMPFYP AAGYWGCTVP  360
GPWSIPWLPQ PTSPNHTALS SGPNSPTLGK HSRDENILKS SNSGDEEPLK ENNAERCLWI  420
PKTLRIDDPG EAARSSIWAT LGIKNDKADT ISGGGLFKAF QSKTDEKNHV AETSPVLQAN  480
PAALSRSLNF HESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-120	Dof family protein