PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904141.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 205aa    MW: 21385.5 Da    PI: 6.5194
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB186.12.6e-5824119297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyveplkvyl+++re+ege
  XP_023904141.1  24 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGE 118
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_023904141.1 119 K 119
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MADSDNDSGG RGGGSGSANE QSPREQDRFL PIANVSRIMK KALPANAKIS KDAKETVQEC  60
VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFED YVEPLKVYLQ RFREMEGEKT  120
VAARDKDGPG GASSVSVSVG LGNGSDVYGV SSSSTSSGMG MMIHQGHVYG SGGFHHMSGG  180
GSGSNSGGLT GPSYAGLGSN TGRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-68NF-YB family protein