PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904256.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 126aa    MW: 14638.2 Da    PI: 4.7692
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB163.53e-5118113297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eq+r+lPianv+rimk+ lP nakisk+aket+qecvsefisfvtseasdkc++e+rkt+ngdd++wal  lGf+dy  p++ yl++yrele e
  XP_023904256.1  18 KEQERLLPIANVGRIMKQSLPPNAKISKEAKETMQECVSEFISFVTSEASDKCRKERRKTVNGDDFCWALEALGFDDYSGPIRRYLHRYRELEVE 112
                     89******************************************************************************************988 PP

           NF-YB  97 k 97 
                     +
  XP_023904256.1 113 R 113
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MDDNVGANDP NEDNNNNKEQ ERLLPIANVG RIMKQSLPPN AKISKEAKET MQECVSEFIS  60
FVTSEASDKC RKERRKTVNG DDFCWALEAL GFDDYSGPIR RYLHRYRELE VERANQDRVR  120
DNEREA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.11e-55NF-YB family protein