PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904262.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 443aa MW: 50661.5 Da PI: 4.2517

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107	1.4e-33	107	198	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk+++i+ed+++++++swse+ +sf+v+de+ fa+++Lp+yFkh+nf+SF+RQLn+YgFkk+++ w+F++++F+ gk++ll++ XP_023904262.1 107 FLKKIFDIVEDPDTNTVVSWSETRDSFIVWDEHVFAEDLLPRYFKHKNFSSFIRQLNTYGFKKIDTVM---------WKFANEEFQSGKRHLLKN 192 9*************************************************************9988.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_023904262.1 193 IKRRNR 198 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MKDPVVTVKV EQGEEEEEEE EEEEEKEQKT PLHHIPAVSG EVVVPEELLN DTAPPSLTLA 60 KETEVINIKE EEEEEEDDEE EEEEDEEEDI STPKPMECLN EQGPPPFLKK IFDIVEDPDT 120 NTVVSWSETR DSFIVWDEHV FAEDLLPRYF KHKNFSSFIR QLNTYGFKKI DTVMWKFANE 180 EFQSGKRHLL KNIKRRNRLN KQEHGVVSLK LRKPGVETEL ESLRKDQNVL QVEILKLRQQ 240 QEDSHNQLTA VEDRIRYAEC GQQQMLLFLT KVTRNPNFAH QFIQTRKLNR ELNGGEISKR 300 RRLLATQGHE SLLEAIDTSL GVNGRNEIQG DSVTVLTDTL QDGVDTFPLQ PSFPAPMDDV 360 LCSPLQDHKV NVMPGTSTPP EMSSVYNVMS EKLMGDNSIV DEDFTMNDSQ FYSELEDLIA 420 KTPDWGGFIS GLVEPAGCVG SMT

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MKDPVVTVKV EQGEEEEEEE EEEEEKEQKT PLHHIPAVSG EVVVPEELLN DTAPPSLTLA  60
KETEVINIKE EEEEEEDDEE EEEEDEEEDI STPKPMECLN EQGPPPFLKK IFDIVEDPDT  120
NTVVSWSETR DSFIVWDEHV FAEDLLPRYF KHKNFSSFIR QLNTYGFKKI DTVMWKFANE  180
EFQSGKRHLL KNIKRRNRLN KQEHGVVSLK LRKPGVETEL ESLRKDQNVL QVEILKLRQQ  240
QEDSHNQLTA VEDRIRYAEC GQQQMLLFLT KVTRNPNFAH QFIQTRKLNR ELNGGEISKR  300
RRLLATQGHE SLLEAIDTSL GVNGRNEIQG DSVTVLTDTL QDGVDTFPLQ PSFPAPMDDV  360
LCSPLQDHKV NVMPGTSTPP EMSSVYNVMS EKLMGDNSIV DEDFTMNDSQ FYSELEDLIA  420
KTPDWGGFIS GLVEPAGCVG SMT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	196	LKNIKRR
2	299	303	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	6e-79	HSF family protein