PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904331.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 234aa    MW: 23286.4 Da    PI: 6.8864
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB186.32.3e-5824119297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+kyre+ege
  XP_023904331.1  24 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGE 118
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_023904331.1 119 K 119
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MADSDNDSGG HNNSNNANSE LSAREQDRFL PIANVSRIMK KALPANAKIS KDAKETVQEC  60
VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFEE YVEPLKIYLQ KYREMEGEKS  120
SVGGAGGGGR PGEKDGGGGG SGGGGGAAGG GGGSGGGVSS SGNSGGFNGV GGMYAGMYGG  180
VMGHHQGHVY GSGGFHHHGI QGIDGGVGVG VGKGGSVVGG GGAGSNGGSI VRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-64NF-YB family protein