PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904680.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 242aa    MW: 27095.2 Da    PI: 6.5187
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1757106255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr ++ +gr+v+eIr p   g+++r++lg+fg+ae+Aa+a++ a++ l+g
  XP_023904680.1  57 QFRGVRKRR-WGRYVSEIRLP---GQKTRIWLGSFGSAEMAARAYDSAALFLKG 106
                     69****887.**********8...557***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MSVMAMGEDQ HETPQNQLKP TPLESKRCPN SKTNKKRTAQ KQQQQQQEAP LRQRDNQFRG  60
VRKRRWGRYV SEIRLPGQKT RIWLGSFGSA EMAARAYDSA ALFLKGNLAS LNFPDMAHSL  120
PRPESSSRRD IQSAAAKAAL PLSDQNINHS ASASASSSSS EEDFWCGFDF DFDFDFDFNM  180
CTTSSFQQVN NAAAEAPPLF MMSPLRFDSV SVDLSQPQDL TGLPMPSPTT DDELFLASYL  240
HM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.11e-31ERF family protein