PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904745.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 365aa MW: 42081.2 Da PI: 5.1252

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.4	7.1e-36	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+i+ed+++++++sws+ +nsfvv+d++ fa +Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_023904745.1 44 FLTKTYDIVEDSTTNHVVSWSRGNNSFVVWDPQAFAMILLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKN 129 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ XP_023904745.1 130 IRRRKT 135 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MNPQGRVKVA FRGASSPFSG TPSSSMVQPP QPLEGIHETG PPPFLTKTYD IVEDSTTNHV 60 VSWSRGNNSF VVWDPQAFAM ILLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL 120 RGQKHLLKNI RRRKTFQLQA SQQALDSCVE VGRFGLDGEV DRLKRDKQVL MVELVKLRQQ 180 QQNTRTYIQS MEDRLRKTEG KQQQMMNFLA RAMQNPNFLQ QLVQQKERRK ELQEAITKKR 240 RRPIDQGPSD LEIGVLGQGG EGNFVKVEPH DFDDMSEFEV SELDRLAMDM HGLSGSQNNP 300 EEEHLEKGVE HESRDMFKDL DEGFWENLFN ESIEEEIGIM GVDQEDDEDV DVLAEHMGYL 360 ASSPK

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MNPQGRVKVA FRGASSPFSG TPSSSMVQPP QPLEGIHETG PPPFLTKTYD IVEDSTTNHV  60
VSWSRGNNSF VVWDPQAFAM ILLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL  120
RGQKHLLKNI RRRKTFQLQA SQQALDSCVE VGRFGLDGEV DRLKRDKQVL MVELVKLRQQ  180
QQNTRTYIQS MEDRLRKTEG KQQQMMNFLA RAMQNPNFLQ QLVQQKERRK ELQEAITKKR  240
RRPIDQGPSD LEIGVLGQGG EGNFVKVEPH DFDDMSEFEV SELDRLAMDM HGLSGSQNNP  300
EEEHLEKGVE HESRDMFKDL DEGFWENLFN ESIEEEIGIM GVDQEDDEDV DVLAEHMGYL  360
ASSPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	242	RRKELQEAITKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-135	HSF family protein