PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904746.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 340aa    MW: 39546.4 Da    PI: 4.8831
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.66.2e-36191102102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y+i+ed+++++++sws+ +nsfvv+d++ fa  +Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++
  XP_023904746.1  19 FLTKTYDIVEDSTTNHVVSWSRGNNSFVVWDPQAFAMILLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKN 104
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_023904746.1 105 IRRRKT 110
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MVQPPQPLEG IHETGPPPFL TKTYDIVEDS TTNHVVSWSR GNNSFVVWDP QAFAMILLPR  60
YFKHNNFSSF VRQLNTYGFR KVDPDRWEFA NEGFLRGQKH LLKNIRRRKT FQLQASQQAL  120
DSCVEVGRFG LDGEVDRLKR DKQVLMVELV KLRQQQQNTR TYIQSMEDRL RKTEGKQQQM  180
MNFLARAMQN PNFLQQLVQQ KERRKELQEA ITKKRRRPID QGPSDLEIGV LGQGGEGNFV  240
KVEPHDFDDM SEFEVSELDR LAMDMHGLSG SQNNPEEEHL EKGVEHESRD MFKDLDEGFW  300
ENLFNESIEE EIGIMGVDQE DDEDVDVLAE HMGYLASSPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203217RRKELQEAITKKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-135HSF family protein