PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904750.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 359aa MW: 41557.4 Da PI: 5.0306

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.4	3.7e-36	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+i+ed+++++++sws+ +nsfvv+d++ fa ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_023904750.1 44 FLTKTYDIVEDSTTNHVVSWSRGNNSFVVWDPQAFAMTLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKN 129 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+++ XP_023904750.1 130 IRRRRT 135 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MNPQGREKEK FRGASSSFSG TPSSSMVQPP QPMEGIHETW PPPFLTKTYD IVEDSTTNHV 60 VSWSRGNNSF VVWDPQAFAM TLLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL 120 RGQKHLLKNI RRRRTIQLQG SQQTLDACVE VGSFGLDGEI DRLKRDKQVL MVELVKLRLQ 180 QQNTRNYIQS MEDRLRKTEG KQQQMMNFLA RAMQNPNFLQ QLAQQKERRK ELQDTITKKR 240 RQLIDQGTSD LEIGVLGQGG EGNFVKVEHH DFGDLSEFEV SELDRFAMDM HGLSGCQNNP 300 EEEHIERGGE HESRDMIKDF DEGLWENLLN DGIEEEIGIM GVDQENDEDL DVLAEHMGY

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MNPQGREKEK FRGASSSFSG TPSSSMVQPP QPMEGIHETW PPPFLTKTYD IVEDSTTNHV  60
VSWSRGNNSF VVWDPQAFAM TLLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL  120
RGQKHLLKNI RRRRTIQLQG SQQTLDACVE VGSFGLDGEI DRLKRDKQVL MVELVKLRLQ  180
QQNTRNYIQS MEDRLRKTEG KQQQMMNFLA RAMQNPNFLQ QLAQQKERRK ELQDTITKKR  240
RQLIDQGTSD LEIGVLGQGG EGNFVKVEHH DFGDLSEFEV SELDRFAMDM HGLSGCQNNP  300
EEEHIERGGE HESRDMIKDF DEGLWENLLN DGIEEEIGIM GVDQENDEDL DVLAEHMGY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	134	RGQKHLLKNIRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-127	HSF family protein